Loading modules for task "make_grid" ... Currently Loaded Modules: 1) contrib/0.1 22) gftl-shared/v1.3.3 2) noaatools/2.0 23) yafyaml/v0.5.1 3) cmake/3.22.1 24) mapl/2.11.0-esmf-8.3.0b09 4) python/3.9.2 25) gfsio/1.4.1 5) hpc/1.1.0 26) landsfcutil/2.4.1 6) intel/2018.4 27) nemsiogfs/2.5.3 7) mkl/2020.2 28) sfcio/1.4.1 8) hpc-intel/2018.4 29) sigio/2.3.2 9) impi/2018.4 30) bacio/2.4.1 10) hpc-impi/2018.4 31) w3nco/2.4.1 11) jasper/2.0.25 32) nemsio/2.5.2 12) zlib/1.2.11 33) w3emc/2.7.3 13) pio/2.5.2 34) hdf5/1.10.6 14) esmf/8.3.0b09 35) netcdf/4.7.4 15) fms/2022.01 36) wgrib2/2.0.8 16) g2/3.4.3 37) srw_common 17) g2tmpl/1.10.0 38) build_orion_intel 18) ip/3.3.3 39) miniconda3/3.8 19) sp/2.3.3 40) miniconda_regional_workflow 20) crtm/2.4.0 41) make_grid.local 21) upp/10.0.10 Launching J-job (jjob_fp) for task "make_grid" ... jjob_fp = "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/jobs/JREGIONAL_MAKE_GRID" ======================================================================== Entering script: "JREGIONAL_MAKE_GRID" In directory: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/jobs" This is the J-job script for the task that generates grid files. ======================================================================== ======================================================================== Entering script: "exregional_make_grid.sh" In directory: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/scripts" This is the ex-script for the task that generates grid files. ======================================================================== core file size (blocks, -c) 0 data seg size (kbytes, -d) unlimited scheduling priority (-e) 0 file size (blocks, -f) unlimited pending signals (-i) 767194 max locked memory (kbytes, -l) unlimited max memory size (kbytes, -m) 113246208 open files (-n) 131072 pipe size (512 bytes, -p) 8 POSIX message queues (bytes, -q) 819200 real-time priority (-r) 0 stack size (kbytes, -s) unlimited cpu time (seconds, -t) unlimited max user processes (-u) 4096 virtual memory (kbytes, -v) unlimited file locks (-x) unlimited All executables will be submitted with command \'time\'. Starting grid file generation... Creating namelist file (rgnl_grid_nml_fp) to be read in by the grid generation executable (exec_fp): rgnl_grid_nml_fp = "/work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc/grid/tmp/regional_grid.nml" exec_fp = "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/bin/regional_esg_grid" arcx, arcy 24.7126 14.8923 For lam= 0.80 the best [smallest possible] optimality criterion, Q, for this domain: 0.505030E-04 The corresponding optimal A and K: 0.1159 -0.3470 The corresponding m_arcx,y: 0.4278997967331E+00 0.2591778891028E+00 x and y central grid resolution in map units: 0.23357E-03 0.23476E-03 Get additional diagnostics from hgrid_ak_rr 1.64user 0.88system 0:02.94elapsed 85%CPU (0avgtext+0avgdata 710356maxresident)k 19632inputs+1761872outputs (1major+5310minor)pagefaults 0swaps "cd_vrfy" operation returned with a message. This command was issued from the script in file: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/scripts/exregional_make_grid.sh" Message from "cd_vrfy" function's "cd" operation: /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc Grid file generation completed successfully. Opening NetCDF grid file for reading/writing: grid_fn = /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc/grid/tmp/regional_grid.nc Dimensions of supergrid are: nxSG = 3664 nySG = 2208 Dimensions of (actual, i.e. computational) grid are: nx = 1832 ny = 1104 Minimum, maximum, and average cell sizes are (based on square root of cell area): min_cell_size = 2972. max_cell_size = 2984. avg_cell_size = 2980. Equivalent global uniform cubed-sphere resolution is: RES_equiv = 3359 Writing avg_cell_size and RES_equiv to the grid specification file as global attributes... Done. 0.17user 0.49system 0:00.72elapsed 93%CPU (0avgtext+0avgdata 178408maxresident)k 15272inputs+876552outputs (0major+3353minor)pagefaults 0swaps "Shaving" grid file with wide halo to obtain grid file with 3-cell-wide halo... id 1820 jd 1092 halo 3 fn_f /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc/g rid/C3359_grid.tile7.halo6.nc fn_s /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc/g rid/tmp/C3359_grid.tile7.halo3.nc 0.08user 0.57system 0:00.79elapsed 83%CPU (0avgtext+0avgdata 77624maxresident)k 15520inputs+877712outputs (0major+4179minor)pagefaults 0swaps "Shaving" grid file with wide halo to obtain grid file with 4-cell-wide halo... id 1820 jd 1092 halo 4 fn_f /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc/g rid/C3359_grid.tile7.halo6.nc fn_s /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc/g rid/tmp/C3359_grid.tile7.halo4.nc 0.08user 0.56system 0:00.73elapsed 89%CPU (0avgtext+0avgdata 77624maxresident)k 1000inputs+880256outputs (0major+4487minor)pagefaults 0swaps "cd_vrfy" operation returned with a message. This command was issued from the script in file: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/scripts/exregional_make_grid.sh" Message from "cd_vrfy" function's "cd" operation: /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc NOTE from make_solo_mosaic: there are 0 contacts (align-contact) congradulation: You have successfully run make_solo_mosaic 0.04user 0.05system 0:00.15elapsed 70%CPU (0avgtext+0avgdata 137864maxresident)k 12480inputs+40outputs (0major+1921minor)pagefaults 0swaps NOTE from make_solo_mosaic: there are 0 contacts (align-contact) congradulation: You have successfully run make_solo_mosaic 0.03user 0.06system 0:00.09elapsed 94%CPU (0avgtext+0avgdata 131212maxresident)k 392inputs+32outputs (0major+2352minor)pagefaults 0swaps NOTE from make_solo_mosaic: there are 0 contacts (align-contact) congradulation: You have successfully run make_solo_mosaic 0.03user 0.10system 0:00.13elapsed 97%CPU (0avgtext+0avgdata 131580maxresident)k 0inputs+24outputs (0major+33104minor)pagefaults 0swaps Creating links in the FIXLAM directory to the grid files... "cd_vrfy" operation returned with a message. This command was issued from function "link_fix" in file: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/ush/link_fix.sh" Message from "cd_vrfy" function's "cd" operation: /work2/noaa/gmtb/manzhang/_BAMS/expt_dirs/testP8_3km_warm_65L_cyc_20220115_nc The variable "settings" specifying values of the namelist variables has been set as follows: settings = 'namsfc': { 'FNALBC': ../fix_lam/C3359.snowfree_albedo.tileX.nc, 'FNALBC2': ../fix_lam/C3359.facsf.tileX.nc, 'FNTG3C': ../fix_lam/C3359.substrate_temperature.tileX.nc, 'FNVEGC': ../fix_lam/C3359.vegetation_greenness.tileX.nc, 'FNVETC': ../fix_lam/C3359.vegetation_type.tileX.nc, 'FNSOTC': ../fix_lam/C3359.soil_type.tileX.nc, 'FNVMNC': ../fix_lam/C3359.vegetation_greenness.tileX.nc, 'FNVMXC': ../fix_lam/C3359.vegetation_greenness.tileX.nc, 'FNSLPC': ../fix_lam/C3359.slope_type.tileX.nc, 'FNABSC': ../fix_lam/C3359.maximum_snow_albedo.tileX.nc, } ======================================================================== Grid files with various halo widths generated successfully!!! Exiting script: "exregional_make_grid.sh" In directory: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/scripts" ======================================================================== ======================================================================== Exiting script: "JREGIONAL_MAKE_GRID" In directory: "/work2/noaa/gmtb/manzhang/_BAMS/ufs-srweather-app_p8/regional_workflow/jobs" ========================================================================